Cell Tracking

Cell tracking

Alexandr Kondratiev, Dmitry Sorokin

This page is devoted to our recently developed automatic cell tracking approach for tracking of abruptly moving and dividing cell nuclei in 2D+t fluorescence microscopy image sequences.

The page provides a supplementary material to the paper A Method for Automatic Tracking of Cell Nuclei in 2D Epifluorescence Microscopy Image Sequences submitted to the 2018 IEEE The eighth International Conference on Image Processing Theory, Tools and Applications (IPTA 2018), November 7-10, 2018, in Xi’an, China.

The ImageJ plugin implementing our approach is available here:
Cell_Tracking-1.0.0.jar (119K)

CNN-based cell tracking with weakly-supervised mitosis detection

Here we provide the supplementary material to the paper A. Y. Kondratiev, Y. Hideyuki, O. Yasushi, A. S. Krylov, D. V. Sorokin, A Method for Automatic Tracking of Cell Nuclei With Weakly-Supervised Mitosis Detection in 2D Microscopy Image Sequences accepted to the 5th International Conference on Biomedical Signal and Image Processing (ICBIP 2020), August 14-16, 2020, Suzhou, China.

An example of the input image sequence and the corresponding results:

Initial image sequence

Nuclei tracking results

The ImageJ plugin implementing the second version of the approach is available here:
Cell_Tracking-1.2.0.jar (88.6Mb)